PAIREF
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start [2022/01/10 21:03] – pryč python 2.7, odkaz na publikaci 2021 malystart [2024/11/18 09:08] (current) – new address maly
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 //Automatic PAIRed REFinement protocol// //Automatic PAIRed REFinement protocol//
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 +<color #00a2e8>**THE WEBSITE HAS BEEN MOVED TO [[https://pairef.structbio.org]]. PLEASE CONTINUE THERE.**</color>
  
 //PAIREF// is a tool for macromolecular crystallographers that performs the //PAIRed REFinement protocol//(([[https://science.sciencemag.org/content/336/6084/1030|P.A. Karplus, K. Diederichs: "Linking crystallographic model and data quality." (2012) Science, 336(6084):1030-3.]] //PAIREF// is a tool for macromolecular crystallographers that performs the //PAIRed REFinement protocol//(([[https://science.sciencemag.org/content/336/6084/1030|P.A. Karplus, K. Diederichs: "Linking crystallographic model and data quality." (2012) Science, 336(6084):1030-3.]]
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 ===== Publications ===== ===== Publications =====
  
-M. Maly, K. Diederichs, J. Dohnalek, P. Kolenko: [[https://doi.org/10.1107/S2052252520005916|Paired refinement under the control of PAIREF]] (2020) //IUCrJ// **7**, 681-692 [[https://doi.org/10.1107/S2052252520005916]]+M. Maly, K. Diederichs, J. Dohnalek, P. Kolenko: [[https://doi.org/10.1107/S2052252520005916|Paired refinement under the control of PAIREF]] (2020) //IUCrJ// **7**, 681-692 [[https://doi.org/10.1107/S2052252520005916]] [[https://pairef.fjfi.cvut.cz/docs/pdf/Maly_2020_Paired_refinement_under_the_control_of_PAIREF.pdf|PDF]]
  
-M. Maly, K. Diederichs, J. Dohnalek, P. Kolenko: [[https://doi.org/10.1107/S2053230X21006129|PAIREF: paired refinement also for Phenix users]] (2021) //Acta Cryst F//**77**, 226-229 [[https://doi.org/10.1107/S2053230X21006129]]+M. Maly, K. Diederichs, J. Dohnalek, P. Kolenko: [[https://doi.org/10.1107/S2053230X21006129|PAIREF: paired refinement also for Phenix users]] (2021) //Acta Cryst F//**77**, 226-229 [[https://doi.org/10.1107/S2053230X21006129]] [[https://pairef.fjfi.cvut.cz/docs/pdf/Maly_2021_PAIREF_paired_refinement_also_for_Phenix_users.pdf|PDF]]
  
  
PAIREF

Table of Contents

  • Homepage
  • Documentation
    • Installation
    • Using PAIREF
    • Graphical interface
    • Troubleshooting
    • Description of functions
    • Tests
    • Credits
  • Workshops
    • Struktura 2024: Python
    • CCP4SW 2024: Lunchtime Byte
    • CCP4SW 2023: Lunchtime Byte
    • Webinar: March 2021
  • GitHub repository
  • PyPI repository